- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | panTro2-110 | mir-519 | ptr-miR-519a | 22/22 | chr19 | + | 50-71 | 59432744-59432825 | 0.999993 | Paralog | 3/5 | 6/47 |
2 | panTro2-110 | mir-519 | mml-miR-519a | 23/25 | chr19 | + | 49-73 | 59432745-59432824 | 0.99999 | Paralog | 3/5 | 6/47 |
3 | panTro2-189 | mir-586 | hsa-miR-586 | 21/22 | chr6 | + | 16-37 | 46267377-46267461 | 0.999984 | Paralog | 3/7 | 2/10 |
4 | panTro2-189 | mir-586 | ptr-miR-586 | 22/23 | chr6 | + | 16-38 | 46267377-46267461 | 0.999982 | Paralog | 3/7 | 2/10 |
5 | panTro2-17 | mir-1278 | hsa-miR-1278 | 20/22 | chr1 | - | 50-70 | 172941909-172941985 | 0.999978 | Paralog | 2/3 | 2/5 |
6 | panTro2-107 | mir-512 | ptr-miR-512 | 21/22 | chr19 | + | 51-72 | 59347809-59347894 | 0.999946 | Paralog | 3/5 | 2/10 |
7 | panTro2-74 | mir-627 | ptr-miR-627 | 21/22 | chr15 | + | 13-34 | 39239140-39239221 | 0.999938 | Paralog | 3/4 | 2/9 |
8 | panTro2-4 | mir-1262 | ptr-miR-1262 | 20/22 | chr1 | + | 52-71 | 69391774-69391852 | 0.999921 | Paralog | 2/6 | 2/10 |
9 | panTro2-74 | mir-627 | mml-miR-627 | 22/22 | chr15 | + | 51-72 | 39239138-39239224 | 0.999916 | Paralog | 3/4 | 2/9 |
10 | panTro2-136 | mir-559 | ptr-miR-559 | 21/21 | chr2a | - | 11-31 | 48514737-48514817 | 0.999822 | Paralog | 2/4 | 2/8 |
11 | panTro2-110 | mir-526 | ptr-miR-526a | 21/22 | chr19 | + | 15-36 | 59432744-59432825 | 0.999791 | Paralog | 2/7 | 4/37 |
12 | panTro2-108 | mir-524 | ptr-miR-524 | 20/21 | chr19 | + | 51-71 | 59410598-59410680 | 0.999776 | Paralog | 2/7 | 2/17 |
13 | panTro2-115 | mir-642 | ptr-miR-642 | 21/22 | chr19 | - | 17-37 | 51290535-51290619 | 0.999758 | Paralog | 3/3 | 2/5 |
14 | panTro2-77 | mir-9 | ptr-miR-9 | 22/23 | chr15 | + | 13-35 | 87102986-87103068 | 0.999551 | Paralog | 41/59 | 3/206 |
15 | panTro2-128 | mir-125 | bfl-miR-125b-as | 22/22 | chr21 | - | 48-69 | 16689200-16689278 | 0.999471 | Paralog | 45/62 | 5/195 |
16 | panTro2-6 | mir-942 | mml-miR-942 | 20/21 | chr1 | + | 11-31 | 120494529-120494608 | 0.999461 | Paralog | 3/9 | 2/17 |
17 | panTro2-77 | mir-9 | mmu-miR-9* | 22/22 | chr15 | + | 51-72 | 87102987-87103068 | 0.999431 | Paralog | 41/59 | 3/206 |
18 | panTro2-118 | mir-643 | mml-miR-643 | 21/22 | chr19 | - | 50-70 | 57943816-57943894 | 0.999431 | Paralog | 3/6 | 2/10 |
19 | panTro2-108 | mir-518 | ptr-miR-527 | 20/20 | chr19 | + | 13-32 | 59410599-59410679 | 0.999421 | Paralog | 3/5 | 8/37 |
20 | panTro2-77 | mir-9 | dre-miR-9* | 21/21 | chr15 | + | 49-69 | 87102990-87103065 | 0.999319 | Paralog | 41/59 | 3/206 |
21 | panTro2-179 | mir-580 | mml-miR-580 | 21/22 | chr5 | - | 50-70 | 79529304-79529380 | 0.999296 | Paralog | 3/6 | 2/10 |
22 | panTro2-144 | mir-1258 | ptr-miR-1258 | 21/21 | chr2b | + | 51-71 | 184912319-184912403 | 0.999291 | Paralog | 2/4 | 2/9 |
23 | panTro2-77 | mir-9 | sko-miR-9 | 20/21 | chr15 | + | 9-29 | 87102990-87103065 | 0.998898 | Paralog | 41/59 | 3/206 |
24 | panTro2-77 | mir-9 | xtr-miR-9 | 21/22 | chr15 | + | 9-30 | 87102990-87103065 | 0.998741 | Paralog | 41/59 | 3/206 |
25 | panTro2-170 | mir-583 | mml-miR-583 | 20/21 | chr5 | + | 14-34 | 19422346-19422427 | 0.998147 | Paralog | 3/4 | 2/8 |
26 | panTro2-120 | mir-523 | ptr-miR-523 | 21/23 | chr19 | - | 47-69 | 59377931-59378007 | 0.997922 | Paralog | 3/4 | 4/20 |
27 | panTro2-119 | mir-523 | ptr-miR-523 | 21/23 | chr19 | - | 49-71 | 59361158-59361236 | 0.996122 | Paralog | 3/4 | 4/20 |
28 | panTro2-126 | mir-297 | rno-miR-297 | 21/23 | chr20 | + | 50-72 | 22087792-22087869 | 0.994571 | Paralog | 5/47 | 10/705 |
29 | panTro2-119 | mir-523 | mml-miR-523a | 20/21 | chr19 | - | 50-70 | 59361158-59361236 | 0.994507 | Paralog | 3/4 | 4/20 |
30 | panTro2-209 | mir-486 | hsa-miR-486-3p | 21/21 | chr8 | + | 51-71 | 38412060-38412138 | 0.99397 | Paralog | 5/16 | 2/32 |
31 | panTro2-209 | mir-486 | ptr-miR-486 | 22/22 | chr8 | + | 9-30 | 38412060-38412137 | 0.993218 | Paralog | 5/16 | 2/32 |
32 | panTro2-112 | mir-518 | ptr-miR-527 | 20/20 | chr19 | + | 13-32 | 59438585-59438665 | 0.992965 | Paralog | 3/5 | 8/37 |
33 | panTro2-121 | mir-523 | ptr-miR-523 | 21/23 | chr19 | - | 49-71 | 59409403-59409481 | 0.991598 | Paralog | 3/4 | 4/20 |
34 | panTro2-86 | mir-127 | hsa-miR-127-5p | 20/22 | chr17 | + | 50-70 | 74226196-74226279 | 0.989686 | Paralog | 13/23 | 2/26 |
35 | panTro2-226 | mir-297 | rno-miR-297 | 21/23 | chrUn | + | 12-34 | 51020900-51020975 | 0.989324 | Paralog | 5/47 | 10/705 |
36 | panTro2-160 | mir-944 | mml-miR-944 | 21/22 | chr3 | - | 49-70 | 195451114-195451191 | 0.987793 | Paralog | 3/6 | 2/9 |
37 | panTro2-122 | mir-371 | cfa-miR-371 | 21/22 | chr19 | - | 14-35 | 59466649-59466733 | 0.987692 | Paralog | 4/15 | 2/26 |
38 | panTro2-33 | mir-125 | bfl-miR-125b-as | 22/22 | chr11 | + | 51-72 | 121028918-121029001 | 0.985078 | Paralog | 45/62 | 5/195 |
39 | panTro2-138 | mir-217 | oan-miR-217* | 22/22 | chr2a_random | - | 49-70 | 712769-712847 | 0.979632 | Paralog | 20/37 | 2/47 |
40 | panTro2-127 | mir-1 | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60347492-60347572 | 0.978677 | Paralog | 41/61 | 4/166 |
41 | panTro2-176 | mir-103 | hsa-miR-103-as | 23/23 | chr5 | + | 10-32 | 170805655-170805734 | 0.974287 | Paralog | 21/38 | 3/118 |
42 | panTro2-138 | mir-217 | gga-miR-217 | 23/24 | chr2a_random | - | 18-41 | 712764-712853 | 0.967362 | Paralog | 20/37 | 2/47 |
43 | panTro2-35 | mir-1224 | mmu-miR-1224 | 20/21 | chr11 | - | 50-70 | 46825424-46825508 | 0.963964 | Paralog | 5/8 | 2/12 |
44 | panTro2-116 | mir-1225 | mml-miR-1225-3p | 21/23 | chr19 | - | 18-40 | 57273847-57273935 | 0.963675 | Paralog | 4/5 | 3/8 |
45 | panTro2-117 | mir-1225 | mml-miR-1225-3p | 21/23 | chr19 | - | 18-40 | 57291153-57291241 | 0.963675 | Paralog | 4/5 | 3/8 |
46 | panTro2-96 | mir-1 | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17598769-17598847 | 0.945758 | Paralog | 41/61 | 4/166 |
47 | panTro2-138 | mir-217 | mmu-miR-217 | 23/23 | chr2a_random | - | 17-39 | 712765-712852 | 0.939537 | Paralog | 20/37 | 2/47 |
48 | panTro2-174 | mir-545 | cfa-miR-545 | 21/21 | chr5 | + | 48-68 | 112717742-112717835 | 0.939072 | Paralog | 5/9 | 2/15 |
49 | panTro2-106 | mir-134 | ggo-miR-134 | 20/21 | chr19 | + | 51-71 | 43561843-43561944 | 0.93753 | Paralog | 11/13 | 2/17 |
50 | panTro2-59 | mir-770 | mmu-miR-770-3p | 20/22 | chr14 | + | 49-69 | 93212689-93212778 | 0.937219 | Paralog | 5/7 | 2/9 |
51 | panTro2-228 | mir-297 | mmu-miR-297a | 20/22 | chrX | + | 12-32 | 5238957-5239035 | 0.931358 | Paralog | 5/47 | 10/705 |
52 | panTro2-207 | mir-1244 | ptr-miR-1244 | 26/26 | chr7 | - | 45-70 | 138999272-138999365 | 0.931069 | Paralog | 2/15 | 13/51 |
53 | panTro2-211 | mir-297 | rno-miR-297 | 21/23 | chr8 | + | 50-72 | 90116714-90116803 | 0.930774 | Paralog | 5/47 | 10/705 |
54 | panTro2-138 | mir-217 | dre-miR-217 | 21/22 | chr2a_random | - | 17-38 | 712765-712852 | 0.914045 | Paralog | 20/37 | 2/47 |
55 | panTro2-174 | mir-545 | hsa-miR-545* | 21/22 | chr5 | + | 48-69 | 112717742-112717835 | 0.912823 | Paralog | 5/9 | 2/15 |
56 | panTro2-204 | mir-374 | hsa-miR-374a* | 20/22 | chr7 | - | 50-70 | 40691553-40691626 | 0.907303 | Paralog | 7/10 | 3/17 |
57 | panTro2-125 | mir-1244 | ptr-miR-1244 | 25/26 | chr20 | + | 49-74 | 18212287-18212373 | 0.898202 | Paralog | 2/15 | 13/51 |
58 | panTro2-20 | mir-886 | hsa-miR-886-5p | 21/23 | chr10 | + | 49-70 | 32281094-32281199 | 0.893396 | Paralog | 3/3 | 2/4 |
59 | panTro2-60 | mir-297 | rno-miR-297 | 21/23 | chr14 | + | 51-73 | 99953151-99953247 | 0.890092 | Paralog | 5/47 | 10/705 |
60 | panTro2-7 | mir-1178 | ptr-miR-1178 | 19/21 | chr1 | + | 48-66 | 122410534-122410620 | 0.888397 | Paralog | 2/4 | 2/6 |
61 | panTro2-129 | mir-378 | ptr-miR-378 | 19/21 | chr22 | + | 33-51 | 19533174-19533274 | 0.882831 | Paralog | 7/10 | 2/14 |
62 | panTro2-165 | mir-760 | ptr-miR-760 | 19/20 | chr4 | - | 50-68 | 3413198-3413287 | 0.867897 | Paralog | 5/14 | 2/15 |
63 | panTro2-24 | mir-297 | rno-miR-297 | 21/23 | chr10 | + | 10-31 | 130496386-130496459 | 0.859751 | Paralog | 5/47 | 10/705 |
64 | panTro2-151 | mir-297 | mml-miR-297 | 19/20 | chr3 | + | 30-48 | 103636229-103636326 | 0.854478 | Paralog | 5/47 | 10/705 |
65 | panTro2-90 | mir-196 | ptr-miR-196a | 21/22 | chr17 | - | 28-49 | 9121105-9121203 | 0.845309 | Paralog | 20/38 | 4/91 |
66 | panTro2-90 | mir-196 | gga-miR-196 | 20/21 | chr17 | - | 23-43 | 9121108-9121198 | 0.835784 | Paralog | 20/38 | 4/91 |
67 | panTro2-41 | mir-297 | rno-miR-297 | 21/23 | chr12 | + | 27-49 | 38049139-38049235 | 0.826141 | Paralog | 5/47 | 10/705 |
68 | panTro2-36 | mir-297 | rno-miR-297 | 21/23 | chr11 | - | 20-42 | 48133961-48134043 | 0.803658 | Paralog | 5/47 | 10/705 |
Total | 68 record(s). |